So how high would I have to set my LVC? Wouldn't it not matter because the batteries are going to be charged on seperate chargers... or am I missing something bigger?

Because say I set my LVC to 3.0 volts that would cut each pack off at 18V. Then when I charge them they would both be balance charged up to 4.2 volts per cell. I don't see what the problem is with that. Some people use 1 charger for 2 batteries in E Revos so this is the same concept but with more cells right?

Like I said before I might be missing something...